The Boston Diaries

The ongoing saga of a programmer who doesn't live in Boston, nor does he even like Boston, but yet named his weblog/journal “The Boston Diaries.”

Go figure.

Wednesday, January 02, 2008

“It's all fun and games until your code gets cancer.”

The genome is littered with old copies of genes and experiments that went wrong somewhere in the recent past—say, the last half a million years. This code is there but inactive. These are called the “pseudo genes”.

Furthermore, 97% of your DNA is commented out. DNA is linear and read from start to end. The parts that should not be decoded are marked very clearly, much like C comments. The 3% that is used directly form the so called “exons”. The comments, that come “inbetween” are called “introns”.

These comments are fascinating in their own right. Like C comments they have a start marker, like /*, and a stop marker, like */. But they have some more structure. Remember that DNA is like a tape—the comments need to be snipped out physically! The start of a comment is almost always indicated by the letters “GC”, which thus corresponds to /*, the end is signalled by “AG”, which is then like */.

Via Reddit, DNA seen through the eyes of a coder

It's an interesting view of DNA, as seen through the eyes of a programmer.

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